High-throughput sequencing technology based microbiomes research

submitted by: psterk1

9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010 (http://gensc.org/gc_wiki/index.php/GSC_9).
High-throughput sequencing technology based microbiomes research presented by Shaochuan Li, Beijing Genomics Institute.

From Ecological Metadata to molecular annotations and back - Long Term Ecological Research Network approach

submitted by: psterk1

9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010 (http://gensc.org/gc_wiki/index.php/GSC_9).
From Ecological Metadata to molecular annotations and back - Long Term Ecological Research Network approach presented by Inigo San Gil, LTER Network Office / National Biological Information Infrastructure

Microbial Inventory Research Across Diverse Aquatic LTERs (MIRADA) Project (Part 1 of 2)

submitted by: psterk1

9th Genomic Standards Consortium Workshop held at JCVI, Rockville, MD, USA April 28-30, 2010 (http://gensc.org/gc_wiki/index.php/GSC_9)
Linda Amaral-Zettler presents the Microbial Inventory Research Across Diverse Aquatic LTERs (MIRADA) Project

The Global Biodiversity Information Facility (GBIF)

submitted by: psterk1

9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010 (http://gensc.org/gc_wiki/index.php/GSC_9).
The Global Biodiversity Information Facility (GBIF) presented by Inigo San Gil on behalf of Giri Palanisamy, Oak Ridge National Laboratory / Global Biodiversity Information Facility

GSC 9: Industry Panel (Part 2 of 3)

submitted by: psterk1
9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010 ( http://gensc.org/gc_wiki/index.php/GSC_9 ). Industries, especially those involved in marketing sequencing platforms and informatics, have a considerable role to play in helping to deliver data standards. Primarily the GSC envisages this role to be through the directed delivery of workflows and SOPs relating to sequence production and analysis. Importantly, they could take a lead on providing a route...

GSC 9 Plenary talk: Communicating Scientific Knowledge: Is progress lagging?

submitted by: psterk1
9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010 ( http://gensc.org/gc_wiki/index.php/GSC_9 ). Plenary talk by David Lipman (NCBI). Over the last 30 years, advances in DNA sequencing technology and other high throughput methods have led to exponential growth in biomedical data. Right from the beginning, the leadership at the National Institutes of Health and other major funding agencies promoted explicit policies on data sharing and also supported...

INSDC: Submission of MIGS/MIMS/MIENS

submitted by: psterk1

9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010 (http://gensc.org/gc_wiki/index.php/GSC_9).
INSDC (DDBJ/EMBL/GenBank). Standards-compliance and submision of MIGS/MIMS/MIENS metadata.

Open dicussion about GSC’s eJournal: ”Standards in Genomic Science” (SIGS)

submitted by: psterk1
9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010 ( http://gensc.org/gc_wiki/index.php/GSC_9 ). Open discussion about GSC's eJournal "Standards in Genomic Sciences" (SIGS; http://standardsingenomics.org/ ) during the SIGS session at GSC 9.

The GSC’s eJournal: ”Standards in Genomic Science” (SIGS)

submitted by: psterk1

9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010.
Update on GSC’s eJournal: ”Standards in Genomic Science” (SIGS; http://standardsingenomics.org/)

The M5 platform

submitted by: psterk1

9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010.
Update on M5 (Metagenomes, Metadata, Meta-analysis, Models and MetaInfrastructure)