A comprehensive overview of how to use the Ensembl Region in Detail view (our main Location view) in order to view data about a genomic region. We focus on the region of the LCT gene in human.
Links from this video:
Video: Patches and Haplotypes in the Human Genome ( http://youtu.be/sPE9j_Hw9HU )
Video: Browsing RNA-Seq Data in Ensembl ( http://youtu.be/9NUibgdkTRY )
FAQ: What styles are available for the data tracks in views like Region in Detail?(...
Full title: Deriving rules and assertions from pharmacogenomics knowledge resources in support of patient drug metabolism efficacy predictions
Abstract:
Objective Pharmacogenomics evaluations of variability in drug metabolic processes may be useful for making individual drug response predictions. We present an approach to deriving ‘phenotype scores’ based on existing pharmacogenomics knowledge and a patient's genomics data. Pharmacogenomics plays an important role in the bioactivation...
Scott Jordan on "Advances in high-throughput speed, low-latency communication for embedded instrumentation" at the 2012 Sequencing, Finishing, Analysis in the Future Meeting held June 5-7, 2012 in Santa Fe, New Mexico.
This video illustrates a search of the ICGC, International Cancer Genome Consortium, for a gene lost in tumor samples. For more details see the blog post: http://blog.openhelix.eu/?p=13404
Rita Colwell on "Experimental Reservoirs of Human Pathogens: The Vibrio cholerae paradigm" at the 2012 Sequencing, Finishing, Analysis in the Future Meeting held June 5-7, 2012 in Santa Fe, New Mexico.
Donna Muzny on "En route to the clinic: Diagnostic sequencing applications using the Ion Torrent" at the 2012 Sequencing, Finishing, Analysis in the Future Meeting held June 5-7, 2012 in Santa Fe, New Mexico.
Tom Brettin on "Building the DOE Systems Biology Knowledgebase" (Kbase) at the 2012 Sequencing, Finishing, Analysis in the Future Meeting held June 5-7, 2012 in Santa Fe, New Mexico.
Today's tip of the week is on Chromohub, an annotated phylogeny of chromatin mediated signaling genes. For more information, check out our blog post at http://blog.openhelix.eu/?p=12671
A tip of the week introducing visualizing genomic data using Galaxy's visualization tool. For more information, check out the blog post at http://blog.openhelix.eu/?p=12439
