Video tip of the week: OpenHelix App on SciVerse to Extend Research

submitted by: OpenHelix
See our blog post at URL http://blog.openhelix.com/?p=10810 for more information on this resource. In today’s tip I will introduce you to another one of our efforts to “extend research” by showing you a glimpse of an OpenHelix app that we designed for the SciVerse platform from Elsevier. This app scans a ScienceDirect journal article for any database names or URLs that we train on, and then displays a list of such resources in the window of the app.

Tip of the Week: eggNOG, orthologous genes

submitted by: OpenHelix

A 5 minute tip on eggNOG, database of orthologous genes. Check out our blog post for more information: http://blog.openhelix.eu/?p=10634

Tip of the Week: Phosphida

submitted by: OpenHelix

THis tip of the week is on Phosphida, a post translational modification database. For more information, see: http://blog.openhelix.eu/?p=10432

Tip of the Week: MapMi, mapping miRNA sequences

submitted by: OpenHelix

Today's tip is on MapMi, a tool to map miRNA sequences to genomic sequences. See http://blog.openhelix.eu/?p=10282 for more information

Video Tip of the Week: The New Database of Genomic Variants – DGV2

submitted by: OpenHelix

For more information about this resource, please see our blog post at URL http://blog.openhelix.eu/?p=10185. In today’s tip I will briefly introduce you to the beta version of the updated Database of Genomic Variants, or DGV.

Video tip of the week: Variation Data from Ensembl

submitted by: OpenHelix

For more information about this resource see our blog post at URL http://blog.openhelix.eu/?p=10091. In today's tip I am going redo a movie originally done by Ensembl on SNP information in Ensembl, but I will use the updated Ensembl release 64.

Tip of the Week: Getting flanking sequence of genomic locations

submitted by: OpenHelix

This week's tip is on using Galaxy to get flanking sequence. See http://blog.openhelix.eu/?p=9808 for more information.

Tip of the Week: Plant comparative genomics with Plaza

submitted by: OpenHelix

This week's tip is how to get gene family phylogenies from Plaza, a plant comparative genomics resources. More information here: http://blog.openhelix.eu/?p=9664

Selecting and viewing data tracks in GBrowse

submitted by: yeastgenome

A tutorial on selecting, viewing and manipulating data tracks in SGD's GBrowse genome browser.

GBrowse navigation basics

submitted by: yeastgenome

A tutorial on basic navigation in SGD's GBrowse genome browser.