Santa Fe

Roger Lasken on "Amplification of Genomic DNA from Single Cells using Multiple Displacement Amplification"

submitted by: JGI
Roger Lasken of the J. Craig Venter Institute discusses the combined use of single cell genomics and metagenomics as well as methods for single-cell sequencing on June 4, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Rex Malmstrom on "Whole Genome Sequencing of Individual Bacterial Cells from the Ocean"

submitted by: JGI
Rex Malmstrom of the DOE Joint Genome Institute discusses single-cell sequencing of Prochlorococcus on June 4, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Eric Pelletier on "Single Amplified Whole Genome Shotgun Applications"

submitted by: JGI
Eric Pelletier of Genoscope discusses new sequencing technology developments to study a single cell at a large scale on June 4, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Joel Berendzen on "Grepping Life: A new Paradigm for Analyzing Metagenomic Data"

submitted by: JGI
Joel Berendzen of Los Alamos National Laboratory discusses a phylogenetic method based on answering the question "What Would Google Do?" on June 4, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Joe Petrosino on "Sequencing, Assembly, and Analysis of Human Microbial Communities"

submitted by: JGI
Joe Petrosino of Baylor College of Medicine discusses using next generation sequencing technologies to study human microbial communities associated with health and disease on June 4, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Nikos Krypides on "Analysis of metagenomic sequences: from megabases to terabases"

submitted by: JGI
Nikos Krypides of the DOE Joint Genome Institute discusses metagenomics and the challenge of dealing with terabases of data on June 4, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Patrick Chain on "A meeting perspective and advances in standards"

submitted by: JGI
Patrick Chain, a DOE JGI scientist at Los Alamos National Laboratory, looks back on previous SFAF meetings and gives an update on the genome standards first publicly proposed in 2009 on June 4, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

John Oliver on "Beyond Nanopores"

submitted by: JGI
John Oliver of NABsys discusses implementing nanopore sequencing on June 3, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Saul Kravitz on "A Comprehensive Platform for NGS Data Analysis"

submitted by: JGI
Saul Kravitz of CLC Bio discusses the company's Genomic Workbench and how it can be used with data from next generation sequencing platforms on June 3, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Mark Roskey on "Sample Prep, Workflow Automation and Advanced Nucleic Acid Fractionation for Next Generation Sequencing"

submitted by: JGI
Mark Roskey of Caliper LifeSciences discusses how the company's technologies fit into the next generation sequencing workflow on June 3, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.
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