Structural Bioinformatics Pharm 201 UCSD Lecture 14

submitted by: Phil

This is lecture 14 from a graduate student class in structural bioinformatics offered at UCSD see http://www.sdsc.edu/pb/edu/pharm201/ The lecture covers the principles of assigning protein secondary structure using teh 3D structure as a starting point with a focus on the Kabsch-Sander algorithm as used in DSSP.

Structural Bioinformatics Pharm 201 UCSD Lecture 11

submitted by: Phil

This is lecture 11 from a graduate student class in structural bioinformatics offered at UCSD see http://www.sdsc.edu/pb/edu/pharm201/ The lecture covers the field of structural immunology and is presented by Dr. Julia Ponomarenko.

Structural Bioinformatics Pharm 201 UCSD Lecture 5

submitted by: Phil

This is lecture 5 from a graduate student class in structural bioinformatics offered at UCSD see http://www.sdsc.edu/pb/edu/pharm201/ The topic is "Data Representation and the Protein Data Bank" presented by Drs. Peter Rose and Andreas Prlic

Structural Bioinformatics Pharm 201 UCSD Lecture 4

submitted by: Phil
This is lecture 4 from a graduate student class in structural bioinformatics offered at UCSD see http://www.sdsc.edu/pb/edu/pharm201/ The topic is "Know How Best to represent Your Data." Historically the PDB format expresses the Lingua Franca of structural bioinformatics, but it has serious flaws. These will be explored and understood in the context of one replacement - mmCIF. Goal: To understand why good data representation is important.

SDSC is Data Centric

linked profile(s): Fran
submitted by: apryl

Fran Berman discusses SDSC's data centric focus and their three key leadership areas.: data-oriented high performance computing, data-storage and preservation, empowering data-oriented communities. Originally posted by SDSC on SDSC's CI Channel at: www.cichannel.org