User Profile

Gkikas Magiorkinis


Name
Gkikas Magiorkinis
Status:
Post-doc
Location:
Greece
Research Interests:
Molecular epidemiology
Affiliations:
Department of Hygiene, Epidemiology and Medical Statistics, Medical School, University of Athens
Publications in PubMed
  1. Ntziora F, Paraskevis D, Haida C, Magiorkinis E, Manesis E, Papatheodoridis G, Manolakopoulos S, Beloukas A, Chryssoy S, Magiorkinis G, Sypsa V, Hatzakis A. Quantitative detection of the M204V hepatitis B virus minor variants by amplification refractory mutation system real-time PCR combined with molecular beacon technology. Journal of clinical microbiology 2009 47(8). DOI:10.1128/JCM.00045-09.
  2. Paraskevis D, Pybus O, Magiorkinis G, Hatzakis A, Wensing AM, van de Vijver DA, Albert J, Angarano G, Asjö B, Balotta C, Boeri E, Camacho R, Chaix ML, Coughlan S, Costagliola D, De Luca A, de Mendoza C, Derdelinckx I, Grossman Z, Hamouda O, Hoepelman I, Horban A, Korn K, Kücherer C, Leitner T, Loveday C, Macrae E, Maljkovic-Berry I, Meyer L, Nielsen C, Op de Coul EL, Ormaasen V, Perrin L, Puchhammer-Stöckl E, Ruiz L, Salminen MO, Schmit JC, Schuurman R, Soriano V, Stanczak J, Stanojevic M, Struck D, Van Laethem K, Violin M, Yerly S, Zazzi M, Boucher CA, Vandamme AM, . Tracing the HIV-1 subtype B mobility in Europe: a phylogeographic approach. Retrovirology 2009 6. DOI:10.1186/1742-4690-6-49.
  3. Magiorkinis G, Paraskevis D, Hatzakis A. Comments on "the distribution of HIV-1 recombination breakpoints" by Jun Fan, Matteo Negroni, David L. Robertson. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2008 8(5). DOI:10.1016/j.meegid.2008.06.007.
  4. Magiorkinis G, Paraskevis D, Schmidt HA, Hatzakis A. The phylogenetic information profile of HIV-1 and the degradation effect of recombination. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2008 8(2). DOI:10.1016/j.meegid.2007.11.002.
  5. Paraskevis D, Magiorkinis E, Magiorkinis G, Sypsa V, Paparizos V, Lazanas M, Gargalianos P, Antoniadou A, Panos G, Chrysos G, Sambatakou H, Karafoulidou A, Skoutelis A, Kordossis T, Koratzanis G, Theodoridou M, Daikos GL, Nikolopoulos G, Pybus OG, Hatzakis A, . Increasing prevalence of HIV-1 subtype A in Greece: estimating epidemic history and origin. The Journal of infectious diseases 2007 196(8). DOI:10.1086/521677.
  6. Magiorkinis G, Ntziora F, Paraskevis D, Magiorkinis E, Hatzakis A. Analysing the evolutionary history of HCV: puzzle of ancient phylogenetic discordance. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2007 7(3). DOI:10.1016/j.meegid.2006.04.003.
  7. Katsoulidou A, Sypsa V, Tassopoulos NC, Boletis J, Karafoulidou A, Ketikoglou I, Tsantoulas D, Vafiadi I, Hatzis G, Skoutelis A, Akriviadis E, Vasiliadis T, Kitis G, Magiorkinis G, Hatzakis A. Molecular epidemiology of hepatitis C virus (HCV) in Greece: temporal trends in HCV genotype-specific incidence and molecular characterization of genotype 4 isolates. Journal of viral hepatitis 2006 13(1). DOI:10.1111/j.1365-2893.2005.00649.x.
  8. Magiorkinis EN, Magiorkinis GN, Paraskevis DN, Hatzakis AE. Re-analysis of a human hepatitis B virus (HBV) isolate from an East African wild born Pan troglodytes schweinfurthii: evidence for interspecies recombination between HBV infecting chimpanzee and human. Gene 2005 349. DOI:10.1016/j.gene.2004.12.021.
  9. Magiorkinis G, Paraskevis D, Magiorkinis E, Vandamme AM, Hatzakis A. Re-analysis of 34 full-length HIV-1 intersubtype recombinant sequences. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2005 5(3). DOI:10.1016/j.meegid.2004.05.010.
  10. Paraskevis D, Magiorkinis E, Magiorkinis G, Kiosses VG, Lemey P, Vandamme AM, Rambaut A, Hatzakis A. Phylogenetic reconstruction of a known HIV-1 CRF04_cpx transmission network using maximum likelihood and Bayesian methods. Journal of molecular evolution 2004 59(5). DOI:10.1007/s00239-004-2651-6.
  11. Paraskevis D, Deforche K, Lemey P, Magiorkinis G, Hatzakis A, Vandamme AM. SlidingBayes: exploring recombination using a sliding window approach based on Bayesian phylogenetic inference. Bioinformatics (Oxford, England) 2005 21(7). DOI:10.1093/bioinformatics/bti139.
  12. Magiorkinis G, Magiorkinis E, Paraskevis D, Vandamme AM, Van Ranst M, Moulton V, Hatzakis A. Phylogenetic analysis of the full-length SARS-CoV sequences: evidence for phylogenetic discordance in three genomic regions. Journal of medical virology 2004 74(3). DOI:10.1002/jmv.20187.
  13. Magiorkinis G, Paraskevis D, Vandamme AM, Magiorkinis E, Sypsa V, Hatzakis A. In vivo characteristics of human immunodeficiency virus type 1 intersubtype recombination: determination of hot spots and correlation with sequence similarity. The Journal of general virology 2003 84. DOI:10.1002/jmv.20187.
  14. Magiorkinis G, Paraskevis D, Magiorkinis E, Vandamme AM, Hatzakis A. Reanalysis of the HIV-1 circulating recombinant form A/E (CRF01_AE): evidence of A/E/G recombination. Journal of acquired immune deficiency syndromes (1999) 2002 30(1). DOI:10.1002/jmv.20187.
  15. Magiorkinis E, Paraskevis D, Magiorkinis G, Chryssou S, Chini M, Lazanas M, Paparizos V, Saroglou G, Antoniadou A, Giamarellou E, Karafoulidou A, Hatzakis A. Mutations associated with genotypic resistance to antiretroviral therapy in treatment naïve HIV-1 infected patients in Greece. Virus research 2002 85(1). DOI:10.1002/jmv.20187.
  16. Paraskevis D, Magiorkinis E, Magiorkinis G, Anastassopoulou C, Lazanas M, Chrysos G, Vandamme AM, Hatzakis A. Molecular characterization of a complex, recombinant human immunodeficiency virus type 1 (HIV-1) isolate (A/G/J/K/?): evidence to support the existence of a novel HIV-1 subtype. The Journal of general virology 2001 82. DOI:10.1002/jmv.20187.