ruchira
User Profile
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Neglected Tropical Diseases CommunityNeglected Tropical Diseases Community
BiophysicsBiophysics is an interdisciplinary area merging different expertises. Here is the starting tentative to aggregate this community mainly joining the American Biophysical Society, IUPAB and the...
BiotechnologyThis community will be SciVee Paradigm in the field of Biotechnology. Scientific fraternity from the field of Molecular and Cell Biology, Biochemistry, Stem Cell Biology, Animal and Plant Tissue...
Teragrid Video CommunityThe TeraGrid Video Community provides a place for viewers to comment, connect and review presentations relevant to TeraGrid. For further information about TeraGrid please see their website at:...
Professional Development SeriesThe Professional Development Series is targeted towards graduate students, but others may find it interesting. It covers those elements of being a successful scientist that are not traditionally...
NeuroscienceThe SciVee neuroscience community. Studying everything from neurons to brains, invertebrate and vertebrate.
Comedy - Science - HumorThe world is a funny, funny place. How else can you explain helium’s ability to improve your singing voice, the Vatican’s planetarium, and the innate joys of bubble wrap? But oddly, science,...
Women in BioinformaticsWe're Highlighting a series of speakers sharing their ground breaking science and their journeys as women in a predominantly male subject area.
Scientific WritingA site for resources on scientific writing, mostly for journals and grants, but also for the general public.
Structural BioinformaticsStructural Bioinformatics is a field of study that uses data on macromolecular structures such as proteins, DNA, RNA, and complexes thereof to make new discoveries about living systems. Examples of...
UCSD Pharm 201Pharm 201 is a core course in the bioinformatics program at UCSD see http://www.sdsc.edu/pb/edu/pharm201/ This is for students from 2008. The course is tied closely to the book Structural...
Metagenomics 2008The third annual conference, hosted by Calit2 at UC San Diego, drew more than 250 participants from around the world to discuss the stunning potential of metagenomics, which could revolutionize...
UCSD Behavioral, Social and Computer Sciences Seminar Series at Calit2Calit2 is sponsoring second year of this popular lecture series bringing together social and behavioral sciences with computer science. The goal of the Behavioral, Social and Computer Sciences... 2008.jpg)
ISCB - International Society for Computational BiologyAs a professional membership society representing computational biologists worldwide, ISCB is dedicated to advancing the understanding of living systems through computation. ISCB produces and...
Evolution - the Molecular LandscapeCold Spring Harbor Laboratory’s 74th Symposium focuses on Evolution in a molecular age Darwin never imagined Video interviews with 22 leaders in the field are freely available online Cold...ChannelsThis user isn't part of any journal.Publications in PubMed- Datta RS, Meacham C, Samad B, Neyer C, Sjölander K. Berkeley PHOG: PhyloFacts orthology group prediction web server. Nucleic acids research 2009. DOI:10.1093/nar/gkp373.
PublicationsRuchira S. Datta, Christopher Meacham, Bushra Samad, Christoph Neyer, and Kimmen Sjölander, “Berkeley PHOG: PhyloFacts orthology group prediction web server”, in Nucleic Acids Research 2009, DOI 10.1093/nar/gkp373
Ruchira S. Datta, “Finding all Nash equilibria of a finite game using polynomial algebra”, invited (and refereed) contribution to Economic Theory, published online: 20 February 2009, DOI 10.1007/s00199-009-0447-z
Ruchira S. Datta, “Universality of Nash Equilibria”, in Mathematics of Operations Research, Vol. 28, No. 3, August 2003, pp. 424–432.
Ruchira S. Datta, “Using Computer Algebra to Compute Nash Equilibria”, in the (refereed) Proceedings of the 2003 International Symposium on Symbolic and Algebraic Computation, August 2003, pp. 74–79.
Mustafa Ergen, Duke Lee, Ruchira Datta, Jeff Ko, Anuj Puri, Raja Sengupta, and Pravin Varaiya, “Comparison of Wireless Token Ring Protocol with IEEE 802.11”, in Journal of Internet Technology, Vol. 4, No. 4.
Published Patent Applications
Inventors: Datta, Ruchira S. Simplifying query terms with transliteration, U.S. Patent Application 20070288230.
Inventors: Datta, Ruchira S. Augmenting queries with synonyms from synonyms map, U.S. Patent Application 20070288448.
Inventors: Datta, Ruchira S., and Lopiano, Fabio. Augmenting queries with synonyms selected using language statistics, U.S. Patent Application 20070288449.
Inventors: Lopiano, Fabio, and Datta, Ruchira S. Query language determination using query terms and interface language, U.S. Patent Application 20070288450.
History of Education and EmploymentRecent Employment Experience
UC Berkeley: California Institute for Quantitative Biosciences; Postdoctoral Researcher; July 2007–; Postdoctoral supervisor: Kimmen Sjölander.
Developing novel computational methods in protein informatics, including protein structure prediction, orthology inference, and prediction of protein-protein interaction.
Google Inc.; Software Engineer; 2004-2006. International Search Quality: Creating and implementing novel algorithm for diacritical insensitivity and transliteration. Creating and implementing novel algorithm for stemming in several languages. Google Book Search: Measuring, modeling, and analyzing user behavior on a website with a complex user interface. Designing and implementing dimensional model and infrastructure to support these analyses. Supervising Ph.D student intern in classification/clustering project.
UC Davis: Mathematics; Lecturer; Winter 2004; Teaching calculus.
Education
University of California at Berkeley, Ph.D., Mathematics, December 2003, "Algebraic Methods in Game Theory", Supervisor: Bernd Sturmfels.
University of California at Berkeley, M.S., Computer Science, December 2002, "Using Computer Algebra To Compute Nash Equilibria", Supervisor: Richard Fateman.
California Institute of Technology, B.S., Mathematics
