User Profile


Chris Rawlings
Research Interests:
Bioinformatics, Data Integration
Rothamsted Research
About chris.rawlings:
I have been involved in Bioinformatics for over 25 years. I am presently head of the Department of Bioinformatics and Biomathematics at Rothamsted Research.
Publications in PubMed
  1. Winnenburg R, Urban M, Beacham A, Baldwin TK, Holland S, Lindeberg M, Hansen H, Rawlings C, Hammond-Kosack KE, Köhler J. PHI-base update: additions to the pathogen host interaction database. Nucleic acids research 2008 36. DOI:10.1093/nar/gkm858.
  2. Mitchell RA, Castells-Brooke N, Taubert J, Verrier PJ, Leader DJ, Rawlings CJ. Wheat Estimated Transcript Server (WhETS): a tool to provide best estimate of hexaploid wheat transcript sequence. Nucleic acids research 2007 35. DOI:10.1093/nar/gkm220.
  3. Baldwin TK, Winnenburg R, Urban M, Rawlings C, Koehler J, Hammond-Kosack KE. The pathogen-host interactions database (PHI-base) provides insights into generic and novel themes of pathogenicity. Molecular plant-microbe interactions : MPMI 2006 19(12). DOI:10.1094/MPMI-19-1451.
  4. Köhler J, Baumbach J, Taubert J, Specht M, Skusa A, Rüegg A, Rawlings C, Verrier P, Philippi S. Graph-based analysis and visualization of experimental results with ONDEX. Bioinformatics (Oxford, England) 2006 22(11). DOI:10.1093/bioinformatics/btl081.
  5. Winnenburg R, Baldwin TK, Urban M, Rawlings C, Köhler J, Hammond-Kosack KE. PHI-base: a new database for pathogen host interactions. Nucleic acids research 2006 34. DOI:10.1093/nar/gkj047.
  6. Koehler J, Rawlings C, Verrier P, Mitchell R, Skusa A, Ruegg A, Philippi S. Linking experimental results, biological networks and sequence analysis methods using Ontologies and Generalised Data Structures. In silico biology 2005 5(1). DOI:10.1093/nar/gkj047.
  7. Harris M, Martin JM, Peden JF, Rawlings CJ. SNP cherry picker: maximizing the chance of finding an association with a disease SNP. Bioinformatics (Oxford, England) 2003 19(16). DOI:10.1093/nar/gkj047.
  8. Martin JM, Mackay LJ, Rawlings CJ. Pedstrip: extracting a maximal subset of available, unrelated individuals from a pedigree. Bioinformatics (Oxford, England) 2003 19(2). DOI:10.1093/nar/gkj047.
  9. Muggleton SH, Bryant CH, Srinivasan A, Whittaker A, Topp S, Rawlings C. Are grammatical representations useful for learning from biological sequence data?--a case study. Journal of computational biology : a journal of computational molecular cell biology 2001 8(5). DOI:10.1089/106652701753216512.
  10. Rawlings CJ, Searls DB. Computational gene discovery and human disease. Current opinion in geneticsdevelopment 1997 7(3). DOI:10.1089/106652701753216512.
  11. Gray PM, Kemp GJ, Rawlings CJ, Brown NP, Sander C, Thornton JM, Orengo CM, Wodak SJ, Richelle J. Macromolecular structure information and databases. The EU BRIDGE Database Project Consortium. Trends in biochemical sciences 1996 21(7). DOI:10.1089/106652701753216512.