PharmGenEd™ Principles and Concepts of Pharmacogenomics

submitted by: KuoOffice

The presentation is divided into several sections as outlined by the powerpoint slide. In this module we will include the basic concepts of pharmacogenomics, ethical, legal, social issues, and a brief introduction of the PharmGenEd program.

Introduction to 3D Virtual Cell

submitted by: Steph

Introduction to 3D Virtual Cell by Phil Bourne

Blue Bird Game

submitted by: SDSCStudentTECH

This game was created using Alice at an Alice Workshop hosted by the San Diego Supercomputer Center. For more information about student workshops visit http://education.sdsc.edu/studenttech/ .

Magician at the Fair

submitted by: SDSCStudentTECH

This video was created at an Alice workshop at the San Diego Supercomputer Center. For more information about Student Workshops visit http://education.sdsc.edu/studenttech/ .

CPU vs GPU: AMBER Code Simulation

submitted by: btolo

The terminal view on the left shows a 'tail' of the AMBER code output for a simulation of Myoglobin, a protein found in muscle fibers. In this video, the output is being run on a single Intel E5462 2.80 GHz CPU. The terminal view on the right shows the same AMBER code output, but run on a single NVIDIA C1060 GPU. The GPU run is about 40 times faster than the CPU run.
Courtesy of Ross Walker, San Diego Supercomputer Center, UC San Diego.

CPU vs GPU: Protein Folding Simulation

submitted by: btolo

This simulation shows a protein folding simulation of TRPCage (an artificially designed protein) running in implicit solvent. The simulation shows a single Intel E5462 2.80GHz CPU versus an NVIDIA C1060 GPU.
Courtesy of Ross Walker, San Diego Supercomputer Center, UC San Diego.

Modeling Early Galaxies Using Radiation Hydrodynamics

submitted by: btolo
This simulation uses a flux-limited diffusion solver to explore the radiation hydrodynamics of early galaxies, in particular, the ionizing radiation created by Population III stars. At the time of this rendering, the simulation has evolved to a redshift of 3.5. The simulation volume is 11.2 comoving megaparsecs, and has a uniform grid of 1024^3 cells, with over 1 billion dark matter and star particles. The simulation was computed on resources of the National Institute for Computational...

Semantic Search through the Neuroscience Information Framework

submitted by: jgrethe

This video tutorial explores advanced search through the Neuroscience Information Framework, a dynamic inventory of Web-based neuroscience resources (i.e. data, materials, and tools). In the tutorial, semantic search is explored and how one can use the NIF ontologies to refine, expand, and customize the search/discovery process.

Web 2.0 Panel

submitted by: dougramsey

A discussion with Brian Dear from Eventful.com, Seth Greenberg from Intuit.com and Turbotax, and Seth Sternberg from Meebo.com on Web 2.0, online enterpreneurship, user communities, advertising, technology and communication.