Alexis Stamatakis on "Rapid Evolutionary Placement of Short Sequence Reads"

submitted by: JGI

Alexis Stamatakis of the Technical University of Munich presents at the JGI/Argonne HPC Workshop on January 26, 2010.

Reconstruction of Alternative Splice Variants and Associated Abundances from Short Sequence Reads (CSHL Genome Informatics Conference 2008)

submitted by: micha
The FLUX CAPACITOR : next generation sequencing technologies provide an unprecedented capacity for surveying the nucleic acid content of cells. This profound sequencing depth may allow in particular for exhaustively sequencing through the large dyanimc range of RNA abundances in the cell, overcoming limitations imposed by current (random) clone selection approaches. However, the very short reads produced by the most cost-effective such technologies make the reconstruction of complete RNA...