MICW - Metagenome Data Integration, Data Storage and Retrieval: Victor Markowitz

submitted by: JGI

DOE JGI's Victor Markowitz gives an overview of IMG challenges at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011.

MICW - Assembly Quality Evaluation: Mihai Pop

submitted by: JGI

University of Maryland's Mihai Pop on "Genome Assembly Forensics: Metrics for Assessing Assembly Correctness" at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011.

MICW - Introduction to Metagenomics at DOE JGI: Susannah Tringe

submitted by: JGI

Susannah Tringe of the DOE Joint Genome Institute talks about the Program Overview and Program Informatics at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011.

Pam Silver at the 2011 DOE JGI User Meeting

submitted by: JGI

Pam Silver of Harvard University on "Designing Biological Systems for Sustainability and Programmed Environmental Interface" at the 6th annual Genomics of Energy & Environment Meeting on March 23, 2011.

Ruth Ley at the 2011 DOE JGI User Meeting

submitted by: JGI

Ruth Ley of Cornell University on "Relating Host Genetic Variation to the Microbiome" at the 6th annual Genomics of Energy & Environment Meeting on March 23, 2011.

Jim Bristow at the 2011 DOE JGI User Meeting

submitted by: JGI

DOE JGI Deputy Director Jim Bristow on the Community Sequencing Program at the 6th annual Genomics of Energy and Environment Meeting on March 23, 2011.

JGI Science @ the Lesher: "The Future of Fuel"

submitted by: JGI
The kickoff event of the "JGI Science at the Lesher" series featured a panel consisting of Joint BioEnergy Institute (JBEI) CEO Jay Keasling, DOE Joint Genome Institute Deputy Director Jim Bristow, and DOE JGI Staff Scientist Susannah Tringe, who are developing ways to convert the solar energy stored in plants into liquid transportation fuels. The panel was moderated by KTVU Channel 2 Health and Science Editor John Fowler moderated a panel consisting of The event took place at the Lesher...

Jim Laugharn on "AFA-based DNA fragmentation"

submitted by: JGI

Jim Laugharn of Covaris discusses a critical first step for the standardization of next gen sequencing on June 3, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Finishing Panel at SFAF

submitted by: JGI

From left to right: Dibyendu Kumar of the University of Florida, Christian Buhay of Baylor College of Medicine, Andries van Tonder of Wellcome Sanger Trust Institute, Anna Montmayeur of the Broad Institute and Karen Davenport of Los Alamos National Laboratory at the Finishing forum on June 3, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Karen Davenport on "LANL Finishing"

submitted by: JGI

Karen Davenport of Los Alamos National Laboratory discusses a high-throughput next generation genome finishing pipeline on June 3, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.