Mayo Clinic Proceedings 2012: A New Era in Journal Stewardship.

submitted by: WentzMR

Dr. William L. Lanier, Professor of Anesthesiology at Mayo Clinic in Rochester, MN, and Editor-in-Chief of Mayo Clinic Proceedings, discusses his editorial appearing in the January 2012 issue of the journal on the redesign of Proceedings and the many exciting new features found there. Available at: http://www.mayoclinicproceedings.org/article/S0025-6196(11)00020-6/fulltext

MICW - Assembly Quality Evaluation: Mihai Pop

submitted by: JGI

University of Maryland's Mihai Pop on "Genome Assembly Forensics: Metrics for Assessing Assembly Correctness" at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011.

Patrick Chain on "A meeting perspective and advances in standards"

submitted by: JGI

Patrick Chain, a DOE JGI scientist at Los Alamos National Laboratory, looks back on previous SFAF meetings and gives an update on the genome standards first publicly proposed in 2009 on June 4, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

John Oliver on "Beyond Nanopores"

submitted by: JGI

John Oliver of NABsys discusses implementing nanopore sequencing on June 3, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Finishing Panel at SFAF

submitted by: JGI

From left to right: Dibyendu Kumar of the University of Florida, Christian Buhay of Baylor College of Medicine, Andries van Tonder of Wellcome Sanger Trust Institute, Anna Montmayeur of the Broad Institute and Karen Davenport of Los Alamos National Laboratory at the Finishing forum on June 3, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Karen Davenport on "LANL Finishing"

submitted by: JGI

Karen Davenport of Los Alamos National Laboratory discusses a high-throughput next generation genome finishing pipeline on June 3, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Jeff Martin on "Rnnotator assembly pipeline"

submitted by: JGI

Jeff Martin of the DOE Joint Genome Institute discusses a de novo transcriptome assembly pipeline from short RNA-Seq reads on June 3, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Sequencing Centers Panel at SFAF

submitted by: JGI
From left to right: Faye Schilkey of NCGR, Johar Ali of OICR, Darren Grafham of Wellcome Trust Sanger Institute, Donna Muzny of the Baylor College of Medicine, Bob Fulton of Washington University, Mike Fitzgerald of the Broad Institute, Jessica Hostetler of the J. Craig Venter Institute and Chris Daum of the DOE Joint Genome Institute discuss sequencing technologies, applications and pipelines on June 2, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Johar Ali on "Genomics at the Ontario Institute for Cancer Reserach"

submitted by: JGI

Johar Ali of the Ontario Institute for Cancer Research discusses genomics and next-gen applications at the OICR on June 2, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.