Mike Fitzgerald on "Sequencing at the Broad"

submitted by: JGI

Mike Fitzgerald of the Broad Institute discusses sequencing platforms and pipeline overviews on June 2, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Chris Daum on "An inside look at the JGI's Sequencing Operation"

submitted by: JGI

Chris Daum of the DOE Joint Genome Institute discusses how the DOE JGI's Production Sequencing group optimizes the sequencer pipelines and assesses quality on the Production line on June 2, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Haley Fiske on "New Applications and Sequencing Instrumentation"

submitted by: JGI

Haley Fiske of Illumina discusses improvements to Illumina platforms and methods on June 2, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Tip of the Week: MINT, Molecular INTeractions Database

submitted by: OpenHelix

Learn more about MINT from our blog http://blog.openhelix.eu/?p=4778 . In this tip of the week we explore the basic search and visualization features of the MINT resource for protein-protein interactions.

Tip of the Week: Genome Variation Tour III

submitted by: OpenHelix

For more information, few the blog post at: http://blog.openhelix.eu/?p=4763 . This tip is the continuation of a genome variation tour. We will look at finding SNPs in LD with our SNP of interest using GVS

Tip of the Week: Genome Variation Tour II

submitted by: OpenHelix

More information can be found here: http://blog.openhelix.eu/?p=4602 . This week's tip in 2nd part in a 5 part series of tips following one variation in an individual's genome across several databases and resources to find out what information we gather about the clinical association of that variation. This wee we look at dbSNP, VarView and OMIM.

Tip of the Week: The Cancer Genome Workbench

submitted by: OpenHelix

For more information about this resource, see our blog post at http://blog.openhelix.eu/?p=4520. The Cancer Genome Workbench gathers cancer information from a wide variety of projects and presents the cumulative data as high-level summary visualizations. With just a bit of acclimation, researchers can utilize this resource to further their understanding of cancer genomics.

Tip of the Week: Genome Variation Tour I

submitted by: OpenHelix

You can read more at http://blog.openhelix.eu/?p=4455 . The first in a multi-part tour of the many resources available to the researcher or clinician looking into the data on genomic variation. Today's tip looks at UCSC Genome Browser and dbSNP.

Tip of the Week: WAVe

submitted by: OpenHelix

A quick introduction to WAVe (Web Analysis of the Variome), a great tool that pulls in a wealth of information about human gene variation. For a more high-resolution version of this tip and more information about the resource, visit the OpenHelix blog.

Uffe Hellsten on the first frog genome, X. tropicalis

submitted by: JGI

DOE JGI's Uffe Hellsten, first author of the April 30, 2010 Science publication about the first amphibian genome to be sequenced, talks about the importance of the African clawed frog.