GSC 12 Session III: Standards Organisations

submitted by: psterk1
The 12th Genomic Standards Consortium Meeting (GSC 12), held at The Max Planck Institute for Marine Microbiology, Bremen, Germany, September 28-30, 2011 ( http://gensc.org/gc_wiki/index.php/GSC_12 ). Barry Smith (University of Buffalo): The World Wide Web Consortium (W3C) Daniele Gerundino (ISO Strategic Adviser to the Secretary-General): ISO Standards Martin Klopfer (OGC): The Open Geospatial Consortium (OGC) Susanna Sansone (University of Oxford): BioSharing

GSC 12 Session II (cont'd): Biodiversity Reports

submitted by: psterk1

The 12th Genomic Standards Consortium Meeting (GSC 12), held at The Max Planck Institute for Marine Microbiology, Bremen, Germany, September 28-30, 2011 (http://gensc.org/gc_wiki/index.php/GSC_12).

Reports from Biodiversity breakout groups

Welcome and background of GSC 12

submitted by: psterk1
The 12th Genomic Standards Consortium Meeting (GSC 12), held at The Max Planck Institute for Marine Microbiology, Bremen, Germany, September 28-30, 2011 ( http://gensc.org/gc_wiki/index.php/GSC_12 ). Dawn Field, "The Genomic Standards Consortium" Pelin Yilmaz, "MIxS and Compliance Working Group" Pier Luigi Buttigieg, "EnvO and Ontologies" Wim de Smet, "Genomic Rosetta Stone" Renzo Kottmann, "GCDML and Developer Working Group" Jeff Grethe, "M5" Robert Robbins, "GSC Biodiversity...

GENECAPP Approach

submitted by: MCW_BBC

Brief description of GENECAPP procedure

WIsconsin CEGS Idea

submitted by: MCW_BBC

The Wisconsin Center of Excellence in Genomics Science

Tip of the Week: SNPxGE2, SNP-coexpression associations

submitted by: OpenHelix

This tip of the week introduces SNPxGE2, a SNP-coexpression association database. See more here:http://blog.openhelix.eu/?p=11050

Tip of the Week: eggNOG, orthologous genes

submitted by: OpenHelix

A 5 minute tip on eggNOG, database of orthologous genes. Check out our blog post for more information: http://blog.openhelix.eu/?p=10634

MICW - High-performance Computing: Brooklin Gore

submitted by: JGI

Morgridge Institute for Research's Brooklin Gore on "High Throughput Computing Impact on Meta Genomics" at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011.

MICW - High-performance Computing: Zhong Wang and Shane Canon

submitted by: JGI

DOE JGI's Zhong Wang, chair of the High-performance Computing session, gives a brief introduction before Berkeley Lab's Shane Canon talks about "Exploiting HPC Platforms for Metagenomics: Challenges and Opportunities" at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011.

MICW - Metagenome Data Integration, Data Storage and Retrieval: Owen White

submitted by: JGI

University of Maryland's Owen White on "Metagenome Data Integration, Data Storage and Retrieval" at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011.