Srinivas Aluru on "Parallel Assembly of Large Genomes from Paired Short Reads"

submitted by: JGI

Srinivas Aluru from Iowa State University presents at the JGI/Argonne HPC Workshop on January 25, 2010.

Jarrod Chapman on "Efficient Short-Read Assembly of Eukaryotic Genomes"

submitted by: JGI

Jarrod Chapman of the DOE JGI gives a talk during the JGI/Argonne HPC Workshop on January 25, 2010.

John Vogel on the Brachypodium distachyon genome

submitted by: JGI

DOE JGI collaborator John Vogel of the U.S. Department of Agriculture (USDA) Agricultural Research Service (ARS), a senior author of the paper on the Brachypodium genome published in the February 11, 2010 issue of the journal Nature, discusses the project in this complement to the DOE Joint Genome Institute's news release (http://tr.im/ND9W).

Jeremy Schmutz on the soybean genome

submitted by: JGI

Jeremy Schmutz, a faculty investigator at the Alabama-based HudsonAlpha Institute for Biotechnology and first author of the paper on the soybean genome sequence published in the January 14, 2010 issue of the journal Nature, discusses the project in this complement to the DOE Joint Genome Institute's news release (http://tr.im/Kiik).

Jonathan Eisen and the GEBA project - video linked to news release re Dec. 2009 Nature paper

submitted by: JGI

DOE JGI Phylogenomics Program Head and UC Davis professor Jonathan Eisen discusses the GEBA project in this complement to the news release regarding the GEBA paper published in the journal Nature on December 24, 2009.

Jonathan Eisen discusses GEBA project at DOE JGI

submitted by: JGI

Jonathan Eisen spoke about the Genomic Encyclopedia of Bacteria and Archaea (GEBA) at the DOE JGI on October 27, 2009.

An introduction to the Ratmine database

submitted by: simont

This video provides a brief introduction to the new Ratmine (http://ratmine.mcw.edu) data warehouse and data mining tool released as part of the Rat Genome Database. It highlights some of Ratmine's key features and shows how to use Ratmine's Templates and Lists to find disease genes, common pathways and display protein-protein interactions and more.

This Week in Virology episode 60 - Making viral RNA

submitted by: profvrr

Hosts Vincent Racaniello and Dickson Despommier continue Virology 101 with a discussion of how RNA viruses produce mRNA and replicate their genomes.

Patrick Chain on Genome Project Standards at GSC8

submitted by: JGI

Patrick Chain of the DOE Joint Genome Institute talks about finishing standards for genome projects at the Genomic Standards Consortium's 8th meeting at the DOE JGI in Walnut Creek, Calif. on Sept. 9, 2009.

Kolker on a Systems Biology Encyclopedia and Sansone on ISA Infrastructure at GSC8

submitted by: JGI

Eugene Kolker from Seattle Children's Hospital briefly discusses "The Encyclopedia of Systems Biology and OMICS," followed by Susanna Sansone from the EBI on "The ISA Infrastructure for multi-omics data" at the Genomic Standards Consortium's 8th meeting at the DOE JGI in Walnut Creek, Calif. on Sept. 11, 2009.