The M5 platform

submitted by: psterk1

9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010.
Update on M5 (Metagenomes, Metadata, Meta-analysis, Models and MetaInfrastructure)

The Microbial Earth Project

submitted by: psterk1

9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010.
The Microbial Earth Project

EnvO-Lite, the Environment Ontology and the description of Habitat

submitted by: psterk1

9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010.
Update on the Environmental Ontology

Genomic Rosetta Stone (GRS): How to register your database identifiers

submitted by: psterk1

9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010.
Genomic Rosetta Stone update

The Genomic Contextual Data Markup Language (GCDML)

submitted by: psterk1

9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010.
Update on GCDML

MIGS/MIMS/MIENS

submitted by: psterk1

9th Genomic Standards Consortium Workshop held at JCVI, Rockville, MD, USA April 28-30, 2010.
Updates on GSC's minimal information checklists MIGS/MIMS/MIENS (for respectively genomes, metagenomes, environmental sequences)

GSC 9: Welcome to JCVI by Karen Nelson and Barbara Methe

submitted by: psterk1

9th Genomic Standards Consortium Workshop held at JCVI, Rockville, MD, USA April 28-30, 2010.
Welcome to JCVI by Karen Nelson.
Presentation by Barbara Methe: The Application of Standards to the NIH Roadmap Human Microbiome Project (HMP

The GSC's Research Coordination Network (RCN4GSC)

submitted by: psterk1

9th Genomic Standards Consortium Workshop held at JCVI, Rockville, MD, USA April 28-30, 2010.
Update of RCN4GSC.

Detlef Wiegel at the 2010 DOE JGI User Meeting

submitted by: JGI

Detlef Wiegel from the Max Planck Institute for Developmental Biology on "Next-generation genetics in plants: Evolutionary tradeoffs, immunity and speciation" on March 25, 2010 at the 5th Annual DOE JGI User Meeting.

GenePRIMP: A tool for improving microbial gene prediction quality

submitted by: JGI

Amrita Pati of the DOE Joint Genome Institute's Genome Biology group describes the software tool GenePRIMP and how it fits into the quality control pipeline for microbial genomics. Further details regarding GenePRIMP appear in a paper published online May 2, 2010 in Nature Methods.