Eric Karsenti at the 2013 Genomics of Energy & Environment Meeting

submitted by: JGI

Eric Karsenti of EMBL delivers the closing keynote on "TARA OCEANS: A Global Analysis of Oceanic Plankton Ecosystems" at the 8th Annual Genomics of Energy & Environment Meeting on March 28, 2013 in Walnut Creek, Calif.

Demo: Using BLAST/BLAT in Ensembl

submitted by: gspudich

We demonstrate the BLAST/BLAT tool in Ensembl. Search for a sequence in www.ensembl.org, and identify hits to the genome, or to genes, with this tool.

Peer Bork at the 2011 DOE JGI User Meeting

submitted by: JGI

Peer Bork of the European Molecular Biology Laboratory on "Comparative Metagenomics of Gut and Ocean: Identification of Microbial Marker Genes for Complex Environmental Properties" at the 6th annual Genomics of Energy & Environment Meeting on March 23, 2011.

INSDC: Submission of MIGS/MIMS/MIENS

submitted by: psterk1

9th Genomic Standards Consortium Workshop at JCVI, Rockville, MD, USA, April 28-30, 2010 (http://gensc.org/gc_wiki/index.php/GSC_9).
INSDC (DDBJ/EMBL/GenBank). Standards-compliance and submision of MIGS/MIMS/MIENS metadata.

Field on GEM Catalogue and Sansone on ISA-GCDML workshop at GSC8

submitted by: JGI

Dawn Field of the NERC Centre for Ecology & Hydrology briefly introduces the GEM Catalogue, followed by Susanna Sansone of the European Bioinformatics Institute who talks about the ISA-GCDML workshop at the Genomic Standards Consortium's 8th meeting at the DOE JGI in Walnut Creek, Calif. on Sept. 9, 2009.

Vaughan on INSDC submission and Kaye on Sequencing Pipelines at GSC8

submitted by: JGI

Bob Vaughan of EMBL on submitting MIGS/MIMS/MIENS information to EMBL-EBI's system, followed by a brief talk from Jon Kaye of the Gordon and Betty Moore Foundation on standards and the foundation's sequencing pipelines at the Genomic Standards Consortium's 8th meeting at the DOE JGI in Walnut Creek, Calif. on Sept. 9, 2009.

The ELIXIR Database Provider Survey

submitted by: cdsouthan

How biological databases are used in the European Union.

Source Organism and Molecule Information at INSDC and the Trace Archives

submitted by: dougramsey
Guy Cochrane, European Nucleotide Archive, EMBL-European Bioinformatics Institute, Welcome Trust Genome Campus The databases of the International Nucleotide Sequence Database Collaboration (INSDC, DDBJ/EMBL/GenBank) and of the Trace and Short Read Archive collaborations between the NCBI and the EBI provide free and comprehensive access to nucleotide sequencing information, from raw sequencing machine output through to functional annotation. As well as offering a direct public portal into...