Tip of the Week: Plant comparative genomics with Plaza

submitted by: OpenHelix

This week's tip is how to get gene family phylogenies from Plaza, a plant comparative genomics resources. More information here: http://blog.openhelix.eu/?p=9664

Tip of the Week: CoGe, Comparative Evolution

submitted by: OpenHelix

Todays tip is on the CoGe tool, SynMap and how to analyze genomic rearrangements. For more information visit the blog post: http://blog.openhelix.eu/?p=9450

Tip of the week: CompaGB for comparing genome browser software

submitted by: OpenHelix

Select software for a project based on specific metrics. For details visit http://blog.openhelix.eu/?p=9189

Tip of the Week: SNPexp

submitted by: OpenHelix

A quick introduction to a web-based tool that allows you to correlate SNPs in a region with gene expression levels. See http://blog.openhelix.eu/?p=9275 for more details.

Tip of the Week: PolySearch

submitted by: OpenHelix

This tip is a quick introduction to PolySearch, for more information, see: http://blog.openhelix.eu/?p=9084

Tip of the Week: converting genome coordinates

submitted by: OpenHelix

Tip of the week, converting genome coordinates between assemblies and genomes using Galaxy. Check out the blog post for more tools and information about this: http://blog.openhelix.eu/?p=8628

Tip of the Week: New and Improved OMIM®

submitted by: OpenHelix

Explore the new interface for the venerable OMIM genetics resource; visit http://blog.openhelix.eu/?p=8539 for more details and references.

Tip of the Week: Allen Institute's Brain Explorer

submitted by: OpenHelix

For more information about this resource see our blog post at URL http://blog.openhelix.eu/?p=8376. We show an overview of how researchers can use the Allen Institute's Brain Explorer to compare detailed gene expression data in two human brains, side-by-side.

Tip of the Week: ORegAnno for regulatory annotation

submitted by: OpenHelix

Literature-curated annotation of regulatory elements + visualize them with UCSC Genome Browser. http://blog.openhelix.eu/?p=7567 for links and references.

Tip of the Week: Melina II for promoter analysis

submitted by: OpenHelix

Melina II is a handy interface for motif discovery. For details and references see our blog at http://blog.openhelix.eu/?p=7124 .