Demo: Using BLAST/BLAT in Ensembl

submitted by: gspudich

We demonstrate the BLAST/BLAT tool in Ensembl. Search for a sequence in www.ensembl.org, and identify hits to the genome, or to genes, with this tool.

Joel Berendzen on "Grepping Life: A new Paradigm for Analyzing Metagenomic Data"

submitted by: JGI

Joel Berendzen of Los Alamos National Laboratory discusses a phylogenetic method based on answering the question "What Would Google Do?" on June 4, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Robert Edgar on "Usearch"

submitted by: JGI

Robert Edgar from drive5.com discusses a method for "breaking through the BLAST barrier to high-throughput sequence analysis" on June 3, 2010 at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM.

Shane Canon on "Running BLAST on HPC Systems and in Hadoop"

submitted by: JGI

Shane Canon of NERSC presents at the JGI/Argonne HPC Workshop on January 26, 2010.

Deanna Church on "Tools for Managing and Comparing Assemblies"

submitted by: JGI

Deanna Church from the National Center for Biotechnology Information speaks at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM on May 28, 2009.

Epigenomics of Cancer - Prof. Wei Li (Part 1, 2009)

submitted by: ralanharris

Prof. Wei Li lectures on studies of transcription factor binding sites and histone modifications using ChIP-chip and Chip-seq assays. Part of the Computer Aided Discovery Methods 2009 course offered at Baylor College of Medicine.

BiG (Blast in Grids) - Demo

submitted by: lciuffo

Application Demo: http://applications.eu-eela.eu/application_details.php?ID=38
Authors: Vicente HERNáNDEZ-GARCíA, Ignacio BLANQUER

Blast Load Simulation of Floating Barricade System to Protect Anchored Vessels

submitted by: Risknology

Simulation created using the CFD code named CEBAM (Computational Explosion And Blast Assessment Model). CEBAM is capable of simulating blast loads from high explosive, vapor clouds, and bursting vessels. Floating barricade system used to increase standoff and hence reduce blast loading on anchored vessels. Research performed by Risknology, Inc.

Blast on Humvee from an IED

submitted by: Risknology

Simulation created using the CFD code named CEBAM (Computational Explosion And Blast Assessment Model). CEBAM is capable of simulating blast loads from high explosive, vapor clouds, and bursting vessels. Blast loading on a Humvee from an IED detonated near the vehicle. Research performed by Risknology, Inc.