Rick Cavicchioli at the 2015 DOE JGI Genomics of Energy & Environment Meeting

submitted by: JGI

Rick Cavicchioli, University of New South Wales, at the 10th Annual Genomics of Energy & Environment Meeting held March 24-26, 2015 in Walnut Creek, Calif.

Age, dietary fiber, breath methane and fecal short chain fatty acids are interrelated in archaea positive humans

submitted by: Judlyn Fernandes
Recent attention has focused on the significance of colonic Archaea in human health and energy metabolism. The main objectives of this study were to determine the associations among the number of fecal Archaea, body mass index (BMI), fecal short chain fatty acid (SCFA) concentrations, and dietary intakes of healthy humans. We collected demographic information, 3-d diet records, and breath and fecal samples from 95 healthy participants who were divided into 2 groups: detectable Archaea...
Authors: Judlyn Fernandes, Angela Wang, Wen Su, Sari Rozenbloom, Amel Taibi, Elena Comelli, Thomas Wolever

Wayne Reeve at the 2013 Genomics of Energy & Environment Meeting

submitted by: JGI

Wayne Reeve of Murdoch University on "Genomics Encyclopedia of Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB): a resource for microsymbiont genomes" at the 8th Annual Genomics of Energy & Environment Meeting on March 27, 2013 in Walnut Creek, Calif.

MICW - Metagenome Data Integration, Data Storage and Retrieval: Victor Markowitz

submitted by: JGI

DOE JGI's Victor Markowitz gives an overview of IMG challenges at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011.

MICW - Scalability of Comparative Analysis, Novel Algorithms and Tools: Paramvir Dehal

submitted by: JGI

Berkeley Lab's Paramvir Dehal on "Managing and Storing large Datasets in MicrobesOnline, metaMicrobesOnline and the DOE Knowledgebase" at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011.

MICW - Single Cells and Metagenomes: Phil Hugenholtz

submitted by: JGI

University of Queensland's Phil Hugenholtz on "Comparison of Normalized and Unnormalized Single Cell and Population Assemblies" at the Metagenomics Informatics Challenges Workshop held at the DOE JGI on October 12-13, 2011.

DNA and the hidden world of microbes

submitted by: phylogenomics

Introduction to the study of microbial diversity using DNA sequencing

A genomic encyclopedia of bacteria and archaea

submitted by: phylogenomics

A talk by Jonathan Eisen at the GME 2007 Conference

PhyloMETAGenomics

submitted by: phylogenomics

Talk for Metagenomics Conference

Jonathan Eisen and the GEBA project - video linked to news release re Dec. 2009 Nature paper

submitted by: JGI

DOE JGI Phylogenomics Program Head and UC Davis professor Jonathan Eisen discusses the GEBA project in this complement to the news release regarding the GEBA paper published in the journal Nature on December 24, 2009.