analysis tool

Tip of the Week: SNPxGE2, SNP-coexpression associations

submitted by: OpenHelix
This tip of the week introduces SNPxGE2, a SNP-coexpression association database. See more here:http://blog.openhelix.eu/?p=11050

Tip of the Week: eggNOG, orthologous genes

submitted by: OpenHelix
A 5 minute tip on eggNOG, database of orthologous genes. Check out our blog post for more information: http://blog.openhelix.eu/?p=10634

Tip of the Week: Phosphida

submitted by: OpenHelix
THis tip of the week is on Phosphida, a post translational modification database. For more information, see: http://blog.openhelix.eu/?p=10432

Tip of the Week: MapMi, mapping miRNA sequences

submitted by: OpenHelix
Today's tip is on MapMi, a tool to map miRNA sequences to genomic sequences. See http://blog.openhelix.eu/?p=10282 for more information

Tip of the Week: UCSC Genome Browser Track Hubs

submitted by: OpenHelix
This tip introduces a new feature at UCSC, Track Hubs. You can read more about it on the blog: http://blog.openhelix.eu/?p=9907

Tip of the Week: Getting flanking sequence of genomic locations

submitted by: OpenHelix
This week's tip is on using Galaxy to get flanking sequence. See http://blog.openhelix.eu/?p=9808 for more information.

PatMatch

submitted by: yeastgenome
This video describes the Pattern Matching Tool available at the Saccharomyces Genome Database (SGD).

YeastMine: List Operations

submitted by: yeastgenome
List operations (union, intersect, and subtract) allow you to combine results from previous YeastMine queries and thus provide a powerful way to build complex queries.

YeastMine: Saving Search Results as a List

submitted by: yeastgenome
Describes how to save some or all of the search results from a YeastMine query into a list.

Tip of the Week: Plant comparative genomics with Plaza

submitted by: OpenHelix
This week's tip is how to get gene family phylogenies from Plaza, a plant comparative genomics resources. More information here: http://blog.openhelix.eu/?p=9664
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