Videos in Genomics Resource Training

An introduction to the Ratmine database
This video provides a brief introduction to the new Ratmine (http://ratmine.mcw.edu) data warehouse and data mining tool released as part of the Rat Genome Database. It highlights some of Ratmine's...

An introduction to the Ratmine database
This video provides a brief introduction to the new Ratmine (http://ratmine.mcw.edu) data warehouse and data mining tool released as part of the Rat Genome Database. It highlights some of Ratmine's...

Finding polymorphic Rat SNPs using RGD's SNPlotyper tool
This screencast shows how to identify polymorphic SNPs between different rat strains using RGD's SNPlotyper tool and the STAR consortium SNP genotype dataset. SNPlotyper is available at the Rat...

Finding polymorphic Rat SNPs using RGD's SNPlotyper tool
This screencast shows how to identify polymorphic SNPs between different rat strains using RGD's SNPlotyper tool and the STAR consortium SNP genotype dataset. SNPlotyper is available at the Rat...

GenePRIMP: A tool for improving microbial gene prediction quality
Amrita Pati of the DOE Joint Genome Institute's Genome Biology group describes the software tool GenePRIMP and how it fits into the quality control pipeline for microbial genomics. Further details...

Genome Variation Server Introduction
This is an introduction to the Genome Variation Server at the University of Washington sponsored by GVS. You can get more freely available training materials on GVS including a longer introductory...

Genome Variation Server Introduction
This is an introduction to the Genome Variation Server at the University of Washington sponsored by GVS. You can get more freely available training materials on GVS including a longer introductory...

Getting Started with GBrowse
So you've heard people talking about "Genome Browsers" but you've never used one and you're not quite sure where to start. This video is just what you've been looking for! We use the Rat Genome...

Introduction to Biomedical Ontologies #2: Anatomy of an Ontology Annotation, part 1
Do you find that, like many who use biomedical ontologies, the only part of an ontology "annotation" you use is the ontology term itself? Perhaps you've noticed from time to time that there are...

Introduction to Biomedical Ontologies 1: What is an Ontology?
While reading an article or looking at a website, have you ever seen the term “ontology” and wondered what that meant? Do you hear people talking about using ontologies and ask yourself what...