Melanin-concentrating hormone receptor 1 polymorphisms are associated with components of energy balance in the CODING study

submitted by: bfontain
BACKGROUND: The melanin-concentrating hormone receptor 1 (MCHR1) is a G protein-coupled receptor that regulates energy balance and body composition in animal models. Inconsistent effects of MCHR1 polymorphisms on energy homeostasis in humans may partly be attributable to environmental factors. OBJECTIVES: We examined the effect of 4 single nucleotide polymorphisms (rs133073, rs133074, rs9611386, and rs882111) in the MCHR1 gene on body composition as well as energy-related lifestyle...
Authors: Bénédicte Fontaine-Bisson, James Thorburn, Anne Gregory, Hongwei Zhang, Guang Sun

biosights: January 20, 2014 - Motors give a new twist to platelet activation

submitted by: JCB
The discoid shape of resting platelets is maintained by a peripheral ring of bundled microtubules called the marginal band. Diagouraga et al. reveal that, upon platelet activation, the motor protein dynein slides microtubules apart, inducing marginal band coiling and the conversion of platelets to a spherical shape. This biosights episode presents the paper by Diagouraga et al. from the January 20, 2014, issue of The Journal of Cell Biology and includes an interview with senior author Karin...

Silencing the Menkes Copper-Transporting ATPase (Atp7a) Gene in Rat Intestinal Epithelial (IEC-6) Cells Increases Iron Flux via Transcriptional Induction of Ferroportin 1 (Fpn1)

submitted by: jfcollins
The Menkes copper-transporting ATPase (Atp7a) gene is induced in rat duodenum during iron deficiency, consistent with copper accumulation in the intestinal mucosa and liver. To test the hypothesis that ATP7A influences intestinal iron metabolism, the Atp7a gene was silenced in rat intestinal epithelial (IEC-6) cells using short hairpin RNA (shRNA) technology. Perturbations in intracellular copper homeostasis were noted in knockdown cells, consistent with the dual roles of ATP7A in pumping...
Authors: Sukru Gulec, James F. Collins

biosights: Decemeber 23, 2013 - Tumor cells WASH away the extracellular matrix

submitted by: JCB
Tumor cells invade through extracellular matrices by forming actin-rich structures called invadopodia, which contain the transmembrane matrix metalloproteinase MT1-MMP. Monteiro et al. reveal that the Arp2/3 activating protein WASH works with the exocyst complex to deliver MT1-MMP from late endosomes to the invadopodial plasma membrane. This biosights episode presents the paper by Monteiro et al. from the December 23, 2013, issue of The Journal of Cell Biology and includes an interview with...

biosights: November 25, 2013 - Caspases work as branch managers

submitted by: JCB
When a growing axon nears its target, it arborizes, or branches, to form numerous synaptic connections. Campbell and Okamoto reveal that localized caspase activation downstream of Slit-Robo signaling promotes arbor dynamics and restricts arbor growth. This biosights episode presents the paper by Campbell and Okamoto from the November 25, 2013, issue of The Journal of Cell Biology and includes an interview with lead author Douglas Campbell (formerly at the RIKEN Brain Science Institute,...

20131029 - Protein Prediction 2 - Tobias Hamp - Homology Based Prediction of Protein Function

submitted by: rostlab

Date: 20131029

Course: Protein Prediction 2

Title: Homology Based Prediction of Protein Function

Speaker: Tobias Hamp

Audience: Computer Science students