Moby, Legacy Apps and the Semantic Web

submitted by: nodrogluap
[Note: poor video quality lasts only for the first 30 seconds] Presentation given at the Web Services Biohackathon '08 in Tokyo, Japan 2008-02-11. It describes tools for using and providing interoperable bioinformatics Web services. This presentation followed another one outlining the (Bio)Moby protocol and its usage, see for more information. Presenter: Paul Gordon .

HIV/AIDS Education in America (MWV14)

submitted by: MicrobeWorld
In this episode of MicrobeWorld Video we ask some leading researchers, education specialists, and public health officials about the state of HIV/AIDS education in America and ideas they have to support the teaching of microbial evolution using the latest HIV/AIDS research ó all while instilling innovative prevention strategies. Filmed at a forum for educators on February, 11, 2008 at the Koshland Science Museum in Washington, D.C. and at San Diego State University, this episode features...

Homogenization of northern U.S. Great Lakes forests due to land use

submitted by: edtech-isu
Human land use of forested regions has intensified worldwide in recent decades, threatening long-term sustainability. Primary effects include conversion of land cover or reversion to an earlier stage of successional development. Both types of change can have cascading effects through ecosystems; however, the long-term effects where forests are allowed to regrow are poorly understood. We quantify the regional-scale consequences of a century of Euro-American land use in the northern U.S. Great...
Authors: Lisa a. Schulte, David j. Mladenoff, Thomas r. Crow, Laura c. Merrick, David t. Cleland

BEMuSE - protein folding for the grid

submitted by: iSGTW

This video is courtesy of EU-IndiaGrid and shows the setup of a simple simulation using BEMuSE, software for faster folding of proteins using grid computing. (

This video shows:

* The structure of the restarts
* The configuration of a simulation
* The submission of the jobs

Resonance: Radio, Wineglasses, Opera Singers and Cycles

submitted by: RayTomes
Resonance is the quality of transmitting even tiny signals between systems that are tuned to the same frequency. Given that cycles of common period are found pervading many different disciplines, perhaps an explanation may be found in resonance. An example is the 160 minute (and associated 80 minute cycle) cycle, found in biological systems, outer planetary spacings, the rotation rates of planets, asteroids and binary stars, solar oscillation and flux and galactic cores. A cosmic pervading...

Installing and using the BioBar toolbar for Firefox

submitted by: simont

This video shows how to install and use the BioBar toolbar on Firefox. This is a nifty addition to the browser that makes accessing many of the usual online databases and tools very easy. It also allows you to easily run a search at these databases without having to navigate to the website first. BioBar can be found at and was written by Jawahar Swaminathan at the EBI.